Mon. Mar 31st, 2025
Common Name

D-Erythrose 4-phosphate Description

D-Erythrose 4-phosphate is a phosphorylated derivative of erythrose that serves as an important intermediate in the pentose phosphate pathway. It is also used in phenylalanine, tyrosine and tryptophan biosynthesis, and it plays a role in vitamin B6 metabolism (KEGG). Structure

Synonyms

Value Source 4-O-phosphono-D-ErythroseChEBI ERYTHOSE-4-phosphATEChEBI D-Erythrose 4-phosphoric acidGenerator ERYTHOSE-4-phosphoric acidGenerator D-Erythrose 4-PO4HMDB D-Erythrose-4-PHMDB D-Erythrose-4-phosphateHMDB Erythrose 4-phosphateHMDB Erythrose 4-PO4HMDB Erythrose-4-PHMDB Erythrose-4-phosphateHMDB Erythrose-4PHMDB Threose 4-phosphateHMDB Erythrose 4-phosphate, (r*,r*)-isomerMeSH Erythrose 4-phosphate, ((r*,r*)-(+-))-isomerMeSH Erythrose 4-phosphate, 14c4-labeled, (r*,r*)-isomerMeSH Erythrose 4-phosphate, ((r*,s*)-(+-))-isomerMeSH

Chemical Formlia

C4H9O7P Average Molecliar Weight

200.0838 Monoisotopic Molecliar Weight

200.008589154 IUPAC Name

[(2R,3R)-2,3-dihydroxy-4-oxobutoxy]phosphonic acid Traditional Name

4-O-phosphono-D-erythrose CAS Registry Number

585-18-2 SMILES

O[C@H](COP(O)(O)=O)[C@@H](O)C=O

InChI Identifier

InChI=1S/C4H9O7P/c5-1-3(6)4(7)2-11-12(8,9)10/h1,3-4,6-7H,2H2,(H2,8,9,10)/t3-,4+/m0/s1

InChI Key

NGHMDNPXVRFFGS-IUYQGCFVSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as monosaccharide phosphates. These are monosaccharides comprising a phosphated group linked to the carbohydrate unit. Kingdom

Chemical entities Super Class

Organic compounds Class

Organic oxygen compounds Sub Class

Organooxygen compounds Direct Parent

Monosaccharide phosphates Alternative Parents

  • Monoalkyl phosphates
  • Beta-hydroxy aldehydes
  • Alpha-hydroxyaldehydes
  • Secondary alcohols
  • 1,2-diols
  • Organic oxides
  • Hydrocarbon derivatives
  • Substituents

  • Monosaccharide phosphate
  • Monoalkyl phosphate
  • Alkyl phosphate
  • Phosphoric acid ester
  • Organic phosphoric acid derivative
  • Beta-hydroxy aldehyde
  • Alpha-hydroxyaldehyde
  • Secondary alcohol
  • 1,2-diol
  • Organic oxide
  • Hydrocarbon derivative
  • Carbonyl group
  • Aldehyde
  • Alcohol
  • Aliphatic acyclic compound
  • Molecliar Framework

    Aliphatic acyclic compounds External Descriptors

  • erythrose phosphate (CHEBI:48153 )
  • Ontology Status

    Detected and Quantified Origin

  • Endogenous
  • Biofunction

    Not Available Application

    Not Available Cellliar locations

  • Cytoplasm (predicted from logP)
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility23.7 mg/mLALOGPS logP-1.9ALOGPS logP-2.4ChemAxon logS-0.93ALOGPS pKa (Strongest Acidic)1.48ChemAxon pKa (Strongest Basic)-3.6ChemAxon Physiological Charge-2ChemAxon Hydrogen Acceptor Count6ChemAxon Hydrogen Donor Count4ChemAxon Polar Surface Area124.29 Å2ChemAxon Rotatable Bond Count5ChemAxon Refractivity36.29 m3·mol-1ChemAxon Polarizability15.41 Å3ChemAxon Number of Rings0ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key GC-MS

    GC-MS Spectrum – GC-MS (1 MEOX; 4 TMS)splash10-0a4i-2946000000-9443f2e925fd6a35c72cView in MoNA GC-MS

    GC-MS Spectrum – GC-MS (1 MEOX; 4 TMS)splash10-0a4i-2967000000-d813d71e392e180e1a1aView in MoNA Predicted GC-MS

    Predicted GC-MS Spectrum – GC-MSNot Available LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QTOF , negativesplash10-002b-9000000000-06d71bced6df9b8baad3View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Positivesplash10-0ue9-3940000000-b2cf1408c63fcd508190View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Positivesplash10-114m-9800000000-ca839aa0d4b5ed1d26a8View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Positivesplash10-052v-9100000000-ce3e3be16de64b5ce20eView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Negativesplash10-054k-8900000000-951c8d2dad21e2f2c479View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Negativesplash10-004i-9100000000-4106e1504853e25f6dffView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Negativesplash10-004i-9000000000-150345a1ab7b74a502c9View in MoNA

    Biological Properties Cellliar Locations

  • Cytoplasm (predicted from logP)
  • Biofluid Locations

  • Cellliar Cytoplasm
  • Tissue Location

    Not Available Pathways

    Name SMPDB Link KEGG Link Glucose-6-phosphate dehydrogenase deficiencySMP00518Not Available Pentose Phosphate PathwaySMP00031map00030 Ribose-5-phosphate isomerase deficiencySMP00519Not Available Transaldolase deficiencySMP00520Not Available Warburg EffectSMP00654Not Available

    Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details Cellliar CytoplasmDetected and Quantified1770 uMAdlit (>18 years old)BothNormal

  • 15882454
  • details

    Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB001614 KNApSAcK ID

    C00007472 Chemspider ID

    109096 KEGG Compound ID

    C00279 BioCyc ID

    ERYTHROSE-4P BiGG ID

    34479 Wikipedia Link

    erythrose-4-phosphate NuGOwiki Link

    HMDB01321 Metagene Link

    HMDB01321 METLIN ID

    6158 PubChem Compound

    122357 PDB ID

    E4P ChEBI ID

    48153

    Product: N-Acetyl-Calicheamicin

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. Tanaka N, Haga A, Uemura H, Akiyama H, Funasaka T, Nagase H, Raz A, Nakamura KT: Inhibition mechanism of cytokine activity of human autocrine motility factor examined by crystal structure analyses and site-directed mutagenesis studies. J Mol Biol. 2002 May 10;318(4):985-97. [PubMed:12054796 ]
    2. Nakayama Y, Kinoshita A, Tomita M: Dynamic simulation of red blood cell metabolism and its application to the analysis of a pathological condition. Theor Biol Med Model. 2005 May 9;2:18. [PubMed:15882454 ]
    3. Huck JH, Struys EA, Verhoeven NM, Jakobs C, van der Knaap MS: Profiling of pentose phosphate pathway intermediates in blood spots by tandem mass spectrometry: application to transaldolase deficiency. Clin Chem. 2003 Aug;49(8):1375-80. [PubMed:12881455 ]
    4. Takeuchi T, Nishino K, Itokawa Y: Improved determination of transketolase activity in erythrocytes. Clin Chem. 1984 May;30(5):658-61. [PubMed:6713626 ]
    5. Talukder AH, Bagheri-Yarmand R, Williams RR, Ragoussis J, Kumar R, Raz A: Antihuman epidermal growth factor receptor 2 antibody herceptin inhibits autocrine motility factor (AMF) expression and potentiates antitumor effects of AMF inhibitors. Clin Cancer Res. 2002 Oct;8(10):3285-9. [PubMed:12374700 ]
    6. Stepanova NG: [Determination of aldolase A activity in the serum of patients with myocardial infarction]. Vopr Med Khim. 1986 Sep-Oct;32(5):89-93. [PubMed:3776121 ]
    7. Mikami M, Sadahira Y, Haga A, Otsuki T, Wada H, Sugihara T: Hypoxia-inducible factor-1 drives the motility of the erythroid progenitor cell line, UT-7/Epo, via autocrine motility factor. Exp Hematol. 2005 May;33(5):531-41. [PubMed:15850830 ]
    8. Zanella A, Izzo C, Rebulla P, Perroni L, Mariani M, Canestri G, Sansone G, Sirchia G: The first stable variant of erythrocyte glucose-phosphate isomerase associated with severe hemolytic anemia. Am J Hematol. 1980;9(1):1-11. [PubMed:7435496 ]
    9. Williams JF, Blackmore PF, Duke CC, MacLeod JK: Fact, uncertainty and speculation concerning the biochemistry of D-erythrose-4-phosphate and its metabolic roles. Int J Biochem. 1980;12(3):339-44. [PubMed:6998788 ]

    Enzymes

    General function:
    Involved in catalytic activity
    Specific function:
    Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (By similarity).
    Gene Name:
    TKTL1
    Uniprot ID:
    P51854
    Molecular weight:
    59302.195
    Reactions
    Beta-D-Fructose 6-phosphate + D-Glyceraldehyde 3-phosphate → D-Erythrose 4-phosphate + Xylulose 5-phosphate details Beta-D-Fructose 6-phosphate + D-Glyceraldehyde 3-phosphate → D-Erythrose 4-phosphate + Xylulose 5-phosphate details
    General function:
    Involved in catalytic activity
    Specific function:
    Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    Gene Name:
    TALDO1
    Uniprot ID:
    P37837
    Molecular weight:
    37539.74
    Reactions
    D-Sedoheptulose 7-phosphate + D-Glyceraldehyde 3-phosphate → D-Erythrose 4-phosphate + Fructose 6-phosphate details D-Sedoheptulose 7-phosphate + D-Glyceraldehyde 3-phosphate → D-Erythrose 4-phosphate + Beta-D-Fructose 6-phosphate details
    General function:
    Involved in catalytic activity
    Specific function:
    Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
    Gene Name:
    TKT
    Uniprot ID:
    P29401
    Molecular weight:
    67876.95
    Reactions
    Beta-D-Fructose 6-phosphate + D-Glyceraldehyde 3-phosphate → D-Erythrose 4-phosphate + Xylulose 5-phosphate details Beta-D-Fructose 6-phosphate + D-Glyceraldehyde 3-phosphate → D-Erythrose 4-phosphate + Xylulose 5-phosphate details
    General function:
    Involved in fructose-bisphosphate aldolase activity
    Specific function:
    Plays a key role in glycolysis and gluconeogenesis. In addition, may also function as scaffolding protein (By similarity).
    Gene Name:
    ALDOA
    Uniprot ID:
    P04075
    Molecular weight:
    39419.675
    Reactions
    Sedoheptulose 1,7-bisphosphate → Dihydroxyacetone phosphate + D-Erythrose 4-phosphate details
    General function:
    Involved in fructose-bisphosphate aldolase activity
    Specific function:
    Not Available
    Gene Name:
    ALDOC
    Uniprot ID:
    P09972
    Molecular weight:
    39455.505
    Reactions
    Sedoheptulose 1,7-bisphosphate → Dihydroxyacetone phosphate + D-Erythrose 4-phosphate details
    General function:
    Involved in fructose-bisphosphate aldolase activity
    Specific function:
    Not Available
    Gene Name:
    ALDOB
    Uniprot ID:
    P05062
    Molecular weight:
    39472.715
    Reactions
    Sedoheptulose 1,7-bisphosphate → Dihydroxyacetone phosphate + D-Erythrose 4-phosphate details
    General function:
    Involved in catalytic activity
    Specific function:
    Plays an essential role in total transketolase activity and cell proliferation in cancer cells; after transfection with anti-TKTL1 siRNA, total transketolase activity dramatically decreases and proliferation was significantly inhibited in cancer cells. Plays a pivotal role in carcinogenesis.
    Gene Name:
    TKTL2
    Uniprot ID:
    Q9H0I9
    Molecular weight:
    67876.625
    Reactions
    Beta-D-Fructose 6-phosphate + D-Glyceraldehyde 3-phosphate → D-Erythrose 4-phosphate + Xylulose 5-phosphate details Beta-D-Fructose 6-phosphate + D-Glyceraldehyde 3-phosphate → D-Erythrose 4-phosphate + Xylulose 5-phosphate details

    PMID: 19709630

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