Fri. Nov 22nd, 2024
Common Name

Trihydroxycoprostanoic acid Description

Trihydroxycoprostanoic acid is excreted in the urine of patients with Zellweger syndrome (PMID 7347441 ). The oxidation trihydroxycoprostanic acid is deficient in liver homogenates from patients with peroxisomal diseases (PMID 2576087 ). Structure

Synonyms

Value Source (3a,5b,7a,12a)-3,7,12-Trihydroxy-cholestane-5-carboxylateHMDB (3a,5b,7a,12a)-3,7,12-Trihydroxy-cholestane-5-carboxylic acidHMDB (3alpha,5beta,7alpha,12alpha)-3,7,12-Trihydroxycholestane-5-carboxylateHMDB (3alpha,5beta,7alpha,12alpha)-3,7,12-Trihydroxycholestane-5-carboxylic acidHMDB 3,7,12-TrihydroxycoprostanateHMDB 3,7,12-Trihydroxycoprostanic acidHMDB 3alpha,7alpha,12alpha-TrihydroxycoprostanateHMDB 3alpha,7alpha,12alpha-Trihydroxycoprostanic acidHMDB 5-ThcaHMDB TrihydroxycoprostanoateHMDB TryhydroxycoprostanateHMDB Tryhydroxycoprostanic acidHMDB 3 alpha,7 alpha,12 alpha-Trihydroxy-5 beta-cholestanoic acidMeSH 3 alpha,7 alpha,12 alpha-Trihydroxycoprostanic acidMeSH

Chemical Formlia

C28H48O5 Average Molecliar Weight

464.6777 Monoisotopic Molecliar Weight

464.350174646 IUPAC Name

(1S,2R,5R,7R,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2,15-dimethyl-14-[(2R)-6-methylheptan-2-yl]tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-7-carboxylic acid Traditional Name

(1S,2R,5R,7R,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2,15-dimethyl-14-[(2R)-6-methylheptan-2-yl]tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-7-carboxylic acid CAS Registry Number

863-39-8 SMILES

[H][C@@]12CC[C@H]([C@H](C)CCCC(C)C)[C@@]1(C)[C@@H](O)C[C@@]1([H])[C@@]2([H])[C@H](O)C[C@@]2(C[C@H](O)CC[C@]12C)C(O)=O

InChI Identifier

InChI=1S/C28H48O5/c1-16(2)7-6-8-17(3)19-9-10-20-24-21(13-23(31)27(19,20)5)26(4)12-11-18(29)14-28(26,25(32)33)15-22(24)30/h16-24,29-31H,6-15H2,1-5H3,(H,32,33)/t17-,18-,19-,20+,21+,22-,23+,24+,26-,27-,28+/m1/s1

InChI Key

JIFNDZCDNLFAKC-YAODFNMUSA-N Chemical Taxonomy Classification

Not classified Ontology Status

Detected and Quantified Origin

  • Endogenous
  • Food
  • Biofunction

  • Cell signaling
  • Fat solubilization and Waste products
  • Fuel and energy storage
  • Fuel or energy source
  • Membrane integrity/stability
  • Application

  • Nutrients
  • Stabilizers
  • Surfactants and Emlisifiers
  • Cellliar locations

  • Extracellliar
  • Membrane
  • Peroxisome
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.013 mg/mLALOGPS logP3.51ALOGPS logP4.47ChemAxon logS-4.5ALOGPS pKa (Strongest Acidic)4.35ChemAxon pKa (Strongest Basic)-0.4ChemAxon Physiological Charge-1ChemAxon Hydrogen Acceptor Count5ChemAxon Hydrogen Donor Count4ChemAxon Polar Surface Area97.99 Å2ChemAxon Rotatable Bond Count6ChemAxon Refractivity129.07 m3·mol-1ChemAxon Polarizability55.37 Å3ChemAxon Number of Rings4ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Not Available Biological Properties Cellliar Locations

  • Extracellliar
  • Membrane
  • Peroxisome
  • Biofluid Locations

  • Blood
  • Tissue Location

  • Liver
  • Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified11.4 +/- 5.2 uMAdlit (>18 years old)BothZellweger syndrome

  • 2921319
  • details BloodDetected and Quantified10.9 +/- 14.6 uMNewborn (0-30 days old)BothAdrenoleukodystrophy (ALD)

  • 2921319
  • details

    Associated Disorders and Diseases Disease References

    Adrenoleukodystrophy

    1. Watkins PA, Chen WW, Harris CJ, Hoefler G, Hoefler S, Blake DC Jr, Balfe A, Kelley RI, Moser AB, Beard ME, et al.: Peroxisomal bifunctional enzyme deficiency. J Clin Invest. 1989 Mar;83(3):771-7. [PubMed:2921319 ]

    Peroxisomal biogenesis defect

    1. Watkins PA, Chen WW, Harris CJ, Hoefler G, Hoefler S, Blake DC Jr, Balfe A, Kelley RI, Moser AB, Beard ME, et al.: Peroxisomal bifunctional enzyme deficiency. J Clin Invest. 1989 Mar;83(3):771-7. [PubMed:2921319 ]

    Associated OMIM IDs

  • 214100 (Peroxisomal biogenesis defect)
  • 300100 (Adrenoleukodystrophy)
  • External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB022877 KNApSAcK ID

    Not Available Chemspider ID

    108961 KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB02163 Metagene Link

    HMDB02163 METLIN ID

    6519 PubChem Compound

    122166 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: Esmolol (hydrochloride)

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. Casteels M, Van Roermund CW, Schepers L, Govaert L, Eyssen HJ, Mannaerts GP, Wanders RJ: Deficient oxidation of trihydroxycoprostanic acid in liver homogenates from patients with peroxisomal diseases. J Inherit Metab Dis. 1989;12(4):415-22. [PubMed:2576087 ]
    2. Wanders RJ, Schutgens RB, Heymans HS: Deficient cholesterol side chain oxidation in patients without peroxisomes (Zellweger syndrome): evidence for the involvement of peroxisomes in bile acid synthesis in man. Clin Chim Acta. 1987 Feb 15;162(3):295-301. [PubMed:3568406 ]
    3. Muller-Hocker J, Bise K, Endres W, Hubner G: [Morphology and diagnosis of Zellweger syndrome. A contribution to combined cytochemical-finestructural identification of peroxisomes in autopsy material and frozen liver tissue with case report]. Virchows Arch A Pathol Anat Histol. 1981;393(1):103-14. [PubMed:7347441 ]

    Enzymes

    General function:
    Involved in binding
    Specific function:
    Ileal protein which stimulates gastric acid and pepsinogen secretion. Seems to be able to bind to bile salts and bilirubins. Isoform 2 is essential for the survival of colon cancer cells to bile acid-induced apoptosis
    Gene Name:
    FABP6
    Uniprot ID:
    P51161
    Molecular weight:
    14371.2
    References
    1. Kurz M, Brachvogel V, Matter H, Stengelin S, Thuring H, Kramer W: Insights into the bile acid transportation system: the human ileal lipid-binding protein-cholyltaurine complex and its comparison with homologous structures. Proteins. 2003 Feb 1;50(2):312-28. [PubMed:12486725 ]

    Transporters

    General function:
    Involved in transporter activity
    Specific function:
    Mediates the Na(+)-independent transport of organic anions such as 17-beta-glucuronosyl estradiol, taurocholate, triiodothyronine (T3), leukotriene C4, dehydroepiandrosterone sulfate (DHEAS), methotrexate and sulfobromophthalein (BSP)
    Gene Name:
    SLCO1B3
    Uniprot ID:
    Q9NPD5
    Molecular weight:
    77402.2
    General function:
    Involved in transporter activity
    Specific function:
    Mediates the Na(+)-independent transport of organic anions such as pravastatin, taurocholate, methotrexate, dehydroepiandrosterone sulfate, 17-beta-glucuronosyl estradiol, estrone sulfate, prostaglandin E2, thromboxane B2, leukotriene C3, leukotriene E4, thyroxine and triiodothyronine. May play an important role in the clearance of bile acids and organic anions from the liver
    Gene Name:
    SLCO1B1
    Uniprot ID:
    Q9Y6L6
    Molecular weight:
    76448.0
    References
    1. Michalski C, Cui Y, Nies AT, Nuessler AK, Neuhaus P, Zanger UM, Klein K, Eichelbaum M, Keppler D, Konig J: A naturally occurring mutation in the SLC21A6 gene causing impaired membrane localization of the hepatocyte uptake transporter. J Biol Chem. 2002 Nov 8;277(45):43058-63. Epub 2002 Aug 23. [PubMed:12196548 ]
    General function:
    Involved in ATP binding
    Specific function:
    May act as an inducible transporter in the biliary and intestinal excretion of organic anions. Acts as an alternative route for the export of bile acids and glucuronides from cholestatic hepatocytes
    Gene Name:
    ABCC3
    Uniprot ID:
    O15438
    Molecular weight:
    169341.1
    General function:
    Involved in ATP binding
    Specific function:
    Involved in the ATP-dependent secretion of bile salts into the canaliculus of hepatocytes
    Gene Name:
    ABCB11
    Uniprot ID:
    O95342
    Molecular weight:
    146405.8
    General function:
    Involved in bile acid:sodium symporter activity
    Specific function:
    Plays a critical role in the sodium-dependent reabsorption of bile acids from the lumen of the small intestine. Plays a key role in cholesterol metabolism
    Gene Name:
    SLC10A2
    Uniprot ID:
    Q12908
    Molecular weight:
    37697.4
    References
    1. Kramer W, Girbig F, Glombik H, Corsiero D, Stengelin S, Weyland C: Identification of a ligand-binding site in the Na+/bile acid cotransporting protein from rabbit ileum. J Biol Chem. 2001 Sep 21;276(38):36020-7. Epub 2001 Jul 10. [PubMed:11447228 ]
    General function:
    Involved in bile acid:sodium symporter activity
    Specific function:
    The hepatic sodium/bile acid uptake system exhibits broad substrate specificity and transports various non-bile acid organic compounds as well. It is strictly dependent on the extracellular presence of sodium.
    Gene Name:
    SLC10A1
    Uniprot ID:
    Q14973
    Molecular weight:
    38118.64
    General function:
    Involved in transporter activity
    Specific function:
    Mediates the Na(+)-independent transport of organic anions such as sulfobromophthalein (BSP) and conjugated (taurocholate) and unconjugated (cholate) bile acids
    Gene Name:
    SLCO1A2
    Uniprot ID:
    P46721
    Molecular weight:
    74144.1
    General function:
    Involved in transporter activity
    Specific function:
    Mediates the Na(+)-independent transport of organic anions such as the thyroid hormones T3 (triiodo-L-thyronine), T4 (thyroxine) and rT3, and of estrone-3-sulfate and taurocholate
    Gene Name:
    SLCO4A1
    Uniprot ID:
    Q96BD0
    Molecular weight:
    77192.5

    PMID: 25655433

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