Fri. Nov 22nd, 2024
Common Name

Coproporphyrinogen I Description

Formed by Uroporphyrinogen decarboxylase from Uroporphyrinogen I by decarboxylation of 4 acetates. Structure

Synonyms

Value Source 3,8,13,18-Tetramethyl-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,17-tetrapropionic acidChEBI COPROPORPHYRIN IChEBI 3,8,13,18-Tetramethyl-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,17-tetrapropionateGenerator 3,8,13,18-Tetramethyl-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,17-tetrapropanoateHMDB 3,8,13,18-Tetramethyl-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,17-tetrapropanoic acidHMDB

Chemical Formlia

C36H44N4O8 Average Molecliar Weight

660.7566 Monoisotopic Molecliar Weight

660.315914404 IUPAC Name

3-[9,14,19-tris(2-carboxyethyl)-5,10,15,20-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(20),3,5,8,10,13,15,18-octaen-4-yl]propanoic acid Traditional Name

coproporphyrinogen I CAS Registry Number

31110-56-2 SMILES

CC1=C2CC3=C(CCC(O)=O)C(C)=C(CC4=C(CCC(O)=O)C(C)=C(CC5=C(CCC(O)=O)C(C)=C(CC(N2)=C1CCC(O)=O)N5)N4)N3

InChI Identifier

InChI=1S/C36H44N4O8/c1-17-21(5-9-33(41)42)29-14-26-19(3)23(7-11-35(45)46)31(39-26)16-28-20(4)24(8-12-36(47)48)32(40-28)15-27-18(2)22(6-10-34(43)44)30(38-27)13-25(17)37-29/h37-40H,5-16H2,1-4H3,(H,41,42)(H,43,44)(H,45,46)(H,47,48)

InChI Key

WIUGGJKHYQIGNH-UHFFFAOYSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as porphyrins. These are compounds containing a fundamental skeleton of four pyrrole nuclei united through the alpha-positions by four methine groups to form a macrocyclic structure. Kingdom

Chemical entities Super Class

Organic compounds Class

Organoheterocyclic compounds Sub Class

Tetrapyrroles and derivatives Direct Parent

Porphyrins Alternative Parents

  • Tetracarboxylic acids and derivatives
  • Substituted pyrroles
  • Heteroaromatic compounds
  • Carboxylic acids
  • Azacyclic compounds
  • Organopnictogen compounds
  • Organonitrogen compounds
  • Organic oxides
  • Hydrocarbon derivatives
  • Carbonyl compounds
  • Substituents

  • Porphyrin
  • Tetracarboxylic acid or derivatives
  • Substituted pyrrole
  • Pyrrole
  • Heteroaromatic compound
  • Carboxylic acid derivative
  • Carboxylic acid
  • Azacycle
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Aromatic heteropolycyclic compound
  • Molecliar Framework

    Aromatic heteropolycyclic compounds External Descriptors

  • coproporphyrinogen (CHEBI:28607 )
  • Ontology Status

    Detected and Quantified Origin

  • Endogenous
  • Biofunction

  • Component of Porphyrin and chlorophyll metabolism
  • Application

    Not Available Cellliar locations

  • Membrane (predicted from logP)
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting Point171 – 174 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.011 mg/mLALOGPS logP1.97ALOGPS logP4.89ChemAxon logS-4.8ALOGPS pKa (Strongest Acidic)3.85ChemAxon Physiological Charge-4ChemAxon Hydrogen Acceptor Count8ChemAxon Hydrogen Donor Count8ChemAxon Polar Surface Area212.36 Å2ChemAxon Rotatable Bond Count12ChemAxon Refractivity181.86 m3·mol-1ChemAxon Polarizability71.34 Å3ChemAxon Number of Rings5ChemAxon Bioavailability0ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Positivesplash10-01ox-0000029000-7cfed66d72503c62d69fView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Positivesplash10-07c7-0000098000-c52b6ccc51ad35ceecd9View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Positivesplash10-0a4i-0102190000-338272475aad39d99e29View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Negativesplash10-0a4i-0000009000-68fb68abaac4161fb473View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Negativesplash10-0a4i-1000029000-03bf0dcb10bc9f0283a9View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Negativesplash10-0a4l-9000043000-4a0f162250fd839a83b3View in MoNA

    Biological Properties Cellliar Locations

  • Membrane (predicted from logP)
  • Biofluid Locations

  • Blood
  • Tissue Location

  • Spleen
  • Pathways

    Name SMPDB Link KEGG Link Acute Intermittent PorphyriaSMP00344Not Available Congenital Erythropoietic Porphyria (CEP) or Gunther DiseaseSMP00345Not Available Hereditary Coproporphyria (HCP)SMP00342Not Available Porphyria Variegata (PV)SMP00346Not Available Porphyrin MetabolismSMP00024map00860

    Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified0.015 (0.01 – 0.02) uMAdlit (>18 years old)Not SpecifiedNormal

  • 9861496
  • details

    Abnormal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified0.5115 (0.3875 – 0.6355) uMAdlit (>18 years old)Male

    Porphyria

  • 9861496
  • details

    Associated Disorders and Diseases Disease References

    Porphyria

    1. Gorchein A, Guo R, Lim CK, Raimundo A, Plilon HW, Bellingham AJ: Porphyrins in urine, plasma, erythrocytes, bile and faeces in a case of congenital erythropoietic porphyria (Gunthers disease) treated with blood transfusion and iron chelation: lack of benefit from oral charcoal. Biomed Chromatogr. 1998 Nov-Dec;12(6):350-6. [PubMed:9861496 ]

    Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB022874 KNApSAcK ID

    Not Available Chemspider ID

    389645 KEGG Compound ID

    C05768 BioCyc ID

    COPROPORPHYRINOGEN_I BiGG ID

    Not Available Wikipedia Link

    Coproporphyrinogen I NuGOwiki Link

    HMDB02158 Metagene Link

    HMDB02158 METLIN ID

    6516 PubChem Compound

    440776 PDB ID

    1CP ChEBI ID

    28607

    Product: Dienestrol

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. Ding Y, Lin B, Huie CW: Binding studies of porphyrins to human serum albumin using affinity capillary electrophoresis. Electrophoresis. 2001 Jul;22(11):2210-6. [PubMed:11504054 ]
    2. Gorchein A, Guo R, Lim CK, Raimundo A, Pullon HW, Bellingham AJ: Porphyrins in urine, plasma, erythrocytes, bile and faeces in a case of congenital erythropoietic porphyria (Gunthers disease) treated with blood transfusion and iron chelation: lack of benefit from oral charcoal. Biomed Chromatogr. 1998 Nov-Dec;12(6):350-6. [PubMed:9861496 ]
    3. Beukeveld GJ, In t Veld G, Havinga R, Groen AK, Wolthers BG, Kuipers F: Relationship between biliary lipid and protoporphyrin secretion; potential role of mdr2 P-glycoprotein in hepatobiliary organic anion transport. J Hepatol. 1996 Mar;24(3):343-52. [PubMed:8778203 ]
    4. Pinelli A, Mussini C, Bertolini B, Buratti M, Trivulzio S: Increased excretion of urine coproporphyrins during daunorubicin administration in patients affected by acute myelogenous leukemia. Pharmacol Res. 2003 Nov;48(5):515-8. [PubMed:12967599 ]
    5. Sakai T, Niinuma Y, Yanagihara S, Ushio K: Liquid-chromatographic separation and determination of coproporphyrins I and III in urine. Clin Chem. 1983 Feb;29(2):350-3. [PubMed:6821943 ]
    6. Cornford P: Transformation of porphobilinogen into porphyrins by preparations from human erythrocytes. Biochem J. 1964 Apr;91(1):64-73. [PubMed:5833390 ]
    7. Pannier E, Viot G, Aubry MC, Grange G, Tantau J, Fallet-Bianco C, Muller F, Cabrol D: Congenital erythropoietic porphyria (Gunthers disease): two cases with very early prenatal manifestation and cystic hygroma. Prenat Diagn. 2003 Jan;23(1):25-30. [PubMed:12533808 ]
    8. Melnikova YaI, Kravchuk ZI, Preygerzon VA, Martsev SP: Functional activation of antibodies on modification with Pd(II) coproporphyrin I N-Hydroxysuccinimide ester. Biochemistry (Mosc). 1997 Aug;62(8):924-7. [PubMed:9360305 ]

    Enzymes

    General function:
    Involved in uroporphyrinogen decarboxylase activity
    Specific function:
    Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
    Gene Name:
    UROD
    Uniprot ID:
    P06132
    Molecular weight:
    40786.58
    Reactions
    Uroporphyrinogen I → Coproporphyrinogen I + Carbon dioxide details

    PMID: 9422389

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